Discover our collection of 4 research tools and applications for antimicrobial resistance.
Found 4 of 4 tools
Kover is an out-of-core implementation of rule-based machine learning algorithms that has been tailored for genomic biomarker discovery. It produces highly interpretable models, based on k-mers, that explicitly highlight genotype-to-phenotype associations.
Antimicrobial peptide screening in genomes and metagenomes. Macrel: (Meta)genomic AMP Classification and Retrieval. Pipeline to mine antimicrobial peptides (AMPs) from (meta)genomes.
Mykrobe is a tool for rapid antibiotic resistance prediction and species identification in bacterial genomes using a reference-free approach based on De Bruijn graphs, primarily designed for Mycobacterium tuberculosis and Staphylococcus aureus.
NCBI AMRFinderPlus is a tool for identifying acquired antimicrobial resistance genes, stress response genes, and virulence genes in bacterial genomes and proteins using the NCBI Reference Gene Catalog and curated expert-validated database.