Discover our collection of 2 research tools and applications for ngs data preprocessing.
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Bases2Fastq operates off-instrument through a command-line interface (CLI) and converts the bases files into the FASTQ file format for secondary analysis with the FASTQ-compatible software of your choice.
bcl2fastq is a Linux-based command-line tool from Illumina that converts raw base call (BCL) files from Illumina sequencers into FASTQ format, while simultaneously demultiplexing data based on sample indexes. It is crucial for analyzing sequencing data, requiring a sample sheet and producing FASTQ files, statistics, and reports.