Discover our collection of 7 research tools and applications for rna-seq analysis.
Found 7 of 7 tools
R/Bioconductor package for differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.
Genomic Mapping and Alignment Program for mRNA and EST Sequences.
IsoQuant is a tool for the genome-based analysis of long RNA reads, such as PacBio or Oxford Nanopores.
IsoSeq v3 contains the newest tools to identify transcripts in PacBio single-molecule sequencing data. Starting in SMRT Link v6.0.0, those tools power the IsoSeq GUI-based analysis application. A composable workflow of existing tools and algorithms, combined with a new clustering technique.
KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome.
Program for comparing, annotating, merging and tracking transcripts in GFF files.
Program for filtering, converting and manipulating GFF files