Discover our collection of 3 research tools and applications for cancer genomics.
Found 4 of 4 tools
A high-speed next-gen sequencing structural variation caller. It calls variants based on alignment-guided positional de Bruijn graph breakpoint assembly, split read, and read pair evidence.
Somatic copy number analysis using WGS paired end wholegenome sequencing
Breakpoints via assembly - Identifies breaks and attempts to assemble rearrangements in whole genome sequencing data.
Control-FREEC is a tool for detection of copy-number changes and allelic imbalances (including LOH) using deep-sequencing data originally developed by the Bioinformatics Laboratory of Institut Curie (Paris). Since 2016, the project has moved to Insitut Cochin, INSERM U1016 (Paris).