Discover our collection of 2 research tools and applications for population genomics.
Found 3 of 3 tools
Scalable gVCF merging and joint variant calling for population sequencing projects.
GenomeScope2 is a reference-free tool that uses k-mer frequency analysis to estimate genome size, heterozygosity, ploidy, and repeat content from raw sequencing data, supporting both diploid and polyploid genomes.
Delly is an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read and long-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome.